Appointed manager in January 2010 followng Chris Willcock's resignation. Former Woodley Sports manager between 2000 and 2003 who arrived initially at Mossley as assistant manager to Chris Willcock in the close season of 2008. He was also previously a player for Woodley and also served at Stockport County, Hyde United, Stalybridge Celtic and Droylsden.
After a great run during the second half of the 2009/10 season Flanagan helped to lift the side from 16th place up to 7th placed finish but unfortunately resigned due to business commitments at the end of the season. He later became manager of Curzon Ashton.
Following around nine tyears in charge at Curzon Flanagan briefly returned to Mossley as assistant manager to Dave Wild in the closed season of 2019. His stay was short lived though as he resigned in November 2019.
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